Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTCYBP12-201ENST00000440559 1134 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC109925.1-201ENST00000478069 331 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 COL6A4P2-205ENST00000509855 506 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AP001804.3-201ENST00000525146 880 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC068339.2-201ENST00000534395 618 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC053481.3-201ENST00000577881 843 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 UBL5P2-201ENST00000583788 219 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AL669831.4-202ENST00000590817 238 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 ZNF92P3-201ENST00000596594 954 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AL096840.1-201ENST00000603287 93 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AL121917.1-203ENST00000605534 577 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC107214.2-201ENST00000608204 634 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 SDR42E1P1-201ENST00000611327 477 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AP001486.3-201ENST00000615334 372 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR7155-201ENST00000615925 56 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 AP001784.1-201ENST00000624107 428 ntBASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CHKB-CPT1BH3BT56 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AL121657.1-201ENST00000327215 531 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU5D-1-201ENST00000363299 116 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 SNORA71.1-201ENST00000364523 117 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP138-201ENST00000365098 114 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 SNORA7.4-201ENST00000384249 137 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU6-851P-201ENST00000384565 107 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR192-201ENST00000384915 110 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 OFD1P18Y-201ENST00000420889 959 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 TMEM167AP1-201ENST00000423409 219 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 TPTE2P6-202ENST00000445572 1007 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 OR6C72P-201ENST00000451403 892 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP233-201ENST00000459153 113 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC117440.1-201ENST00000474107 571 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC096751.1-202ENST00000502691 1067 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC112673.1-201ENST00000513168 575 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC091826.1-201ENST00000514065 313 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC022634.1-201ENST00000520765 532 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 CKS1BP7-201ENST00000522230 235 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC007991.1-201ENST00000522680 631 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 COX6CP5-201ENST00000527162 228 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 SNRPGP16-201ENST00000533275 226 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 CYCSP26-201ENST00000534107 320 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC106900.2-201ENST00000604994 317 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AL136295.6-201ENST00000610486 658 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AL162574.2-201ENST00000614618 657 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 UCA1.1-201ENST00000620952 75 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC243312.2-201ENST00000623340 601 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC018692.3-201ENST00000623929 123 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.35□□□□□ -2.19
CHKB-CPT1BH3BT56 AC024341.1-201ENST00000526444 1552 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AL049781.1-201ENST00000623195 3585 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP258-201ENST00000362750 119 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 U3.20-201ENST00000390909 217 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL21P17-201ENST00000397467 475 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 AL353692.2-201ENST00000407054 335 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RN7SKP159-201ENST00000410657 292 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU4-78P-201ENST00000410940 126 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 BTF3P9-201ENST00000418784 283 ntBASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.34□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL37P1-201ENST00000432310 284 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms