Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AMD1P2-201ENST00000412936 992 ntBASIC1.91□□□□□ -2.1
SPENQ96T58 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SPENQ96T58 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.91□□□□□ -2.1
SPENQ96T58 RPL23AP58-201ENST00000440453 469 ntBASIC1.91□□□□□ -2.1
SPENQ96T58 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.91□□□□□ -2.1
SPENQ96T58 RPS27P29-201ENST00000463110 252 ntBASIC1.91□□□□□ -2.1
SPENQ96T58 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.91□□□□□ -2.1
SPENQ96T58 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.91□□□□□ -2.1
SPENQ96T58 AL160394.1-201ENST00000624765 724 ntBASIC1.91□□□□□ -2.1
SPENQ96T58 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SPENQ96T58 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPENQ96T58 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SPENQ96T58 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
SPENQ96T58 RPS15AP12-201ENST00000419498 388 ntBASIC1.91□□□□□ -2.1
SPENQ96T58 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPENQ96T58 OR5H15-201ENST00000383696 930 ntBASIC1.9□□□□□ -2.1
SPENQ96T58 RN7SKP247-201ENST00000411094 308 ntBASIC1.9□□□□□ -2.1
SPENQ96T58 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.9□□□□□ -2.1
SPENQ96T58 AL356806.1-201ENST00000422524 916 ntBASIC1.9□□□□□ -2.1
SPENQ96T58 NDUFB4P6-201ENST00000436819 366 ntBASIC1.9□□□□□ -2.1
SPENQ96T58 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.9□□□□□ -2.1
SPENQ96T58 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.1
SPENQ96T58 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.9□□□□□ -2.1
SPENQ96T58 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.9□□□□□ -2.11
SPENQ96T58 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SPENQ96T58 AL358453.1-201ENST00000422522 250 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.9□□□□□ -2.11
SPENQ96T58 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 AC245517.5-201ENST00000611529 162 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.9□□□□□ -2.11
SPENQ96T58 CU459211.1-201ENST00000635667 749 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPENQ96T58 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.9□□□□□ -2.11
SPENQ96T58 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SPENQ96T58 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SPENQ96T58 MIR583-201ENST00000384846 75 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 PDCL2P2-201ENST00000533651 189 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.9□□□□□ -2.11
SPENQ96T58 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
SPENQ96T58 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPENQ96T58 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SPENQ96T58 RNU6-392P-201ENST00000364926 101 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC245517.2-201ENST00000442890 346 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPENQ96T58 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.89□□□□□ -2.11
SPENQ96T58 XKRY-201ENST00000510392 1100 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.89□□□□□ -2.11
SPENQ96T58 AMZ2P1-203ENST00000565833 850 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 APOOP1-201ENST00000604695 592 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC126118.1-201ENST00000607744 628 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPENQ96T58 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPENQ96T58 SAR1AP2-201ENST00000392696 594 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPENQ96T58 HMGB1P11-201ENST00000413899 637 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC092851.1-201ENST00000535964 478 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC091515.1-201ENST00000548110 679 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC108479.2-201ENST00000617314 601 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 AC002543.1-201ENST00000299783 1954 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPENQ96T58 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC233279.1-201ENST00000455300 423 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SPENQ96T58 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.89□□□□□ -2.11
SPENQ96T58 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.89□□□□□ -2.11
SPENQ96T58 Z99129.2-201ENST00000619967 314 ntBASIC1.89□□□□□ -2.11
SPENQ96T58 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
SPENQ96T58 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.89□□□□□ -2.11
SPENQ96T58 AL133412.1-201ENST00000380194 2992 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.88□□□□□ -2.11
SPENQ96T58 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.88□□□□□ -2.11
SPENQ96T58 AC133473.1-201ENST00000455173 299 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 RPS27P27-201ENST00000498779 255 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SPENQ96T58 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.88□□□□□ -2.11
SPENQ96T58 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
SPENQ96T58 RNU6-707P-201ENST00000364647 95 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 AP000275.1-201ENST00000411943 390 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPENQ96T58 Z73417.1-201ENST00000447373 778 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 AC104090.1-201ENST00000506341 1171 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 AL160237.3-201ENST00000604114 1013 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SPENQ96T58 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.88□□□□□ -2.11
SPENQ96T58 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.88□□□□□ -2.11
SPENQ96T58 AC092798.1-201ENST00000458542 409 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.88□□□□□ -2.11
SPENQ96T58 AL163540.1-201ENST00000485382 386 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 PROS2P-201ENST00000474651 1951 ntBASIC1.88□□□□□ -2.11
SPENQ96T58 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPENQ96T58 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPENQ96T58 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.87□□□□□ -2.11
SPENQ96T58 RNU2-6P-201ENST00000411404 190 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms