Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MRPS31P2-201ENST00000451581 518 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 FAM60DP-201ENST00000524174 632 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AP001636.2-201ENST00000525517 696 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AL360012.1-201ENST00000602813 131 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AL021407.1-201ENST00000404531 386 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 RNA5SP118-201ENST00000410385 109 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 HSPE1P28-201ENST00000443139 211 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 FCF1P3-201ENST00000496394 590 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC243773.3-201ENST00000613270 256 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC010329.2-201ENST00000595195 2737 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 RPL36AP10-201ENST00000421785 322 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC011242.1-201ENST00000433596 1158 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC117532.1-201ENST00000514638 323 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC007423.1-201ENST00000605009 627 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 RPS7P5-201ENST00000441482 581 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ELOCP23-201ENST00000452014 332 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 RPL38P4-201ENST00000502376 214 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AL031658.2-201ENST00000616850 651 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 LSM3P2-201ENST00000551246 273 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 SAGE4P-201ENST00000442271 3381 ntBASIC1.02□□□□□ -2.25
SYNE2Q8WXH0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 SKP1P3-201ENST00000429280 487 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AP006245.1-201ENST00000522549 120 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 SDCBPP3-201ENST00000419629 891 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 CST9LP2-201ENST00000437612 320 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 MIR1291-201ENST00000627649 87 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 RNU6-1027P-201ENST00000383998 107 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 DUXAP8-207ENST00000456786 622 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 NAMPTP2-201ENST00000505629 1115 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC034244.1-201ENST00000507687 207 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 POLHP1-201ENST00000411806 470 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 PGBD4P6-201ENST00000421501 610 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC092473.1-201ENST00000441098 221 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC091953.2-201ENST00000623979 160 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC067945.1-201ENST00000342609 618 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 RNU6-629P-201ENST00000384061 103 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 MIR195-201ENST00000385194 87 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AL445646.1-201ENST00000431784 216 ntBASIC1.01□□□□□ -2.25
SYNE2Q8WXH0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms