Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC111000.2-201ENST00000507775 550 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AL157394.1-201ENST00000562983 1224 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 MIR3200-201ENST00000580767 85 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 MIR5195-201ENST00000583555 115 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 OR4G1P-201ENST00000588632 938 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC006116.7-201ENST00000590141 756 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC096947.1-201ENST00000603233 470 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC015871.2-201ENST00000603605 948 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AL020991.1-201ENST00000612314 373 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AL442067.2-201ENST00000614033 363 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 RMST_10.1-201ENST00000616309 154 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC010338.1-201ENST00000621823 717 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC009039.2-201ENST00000624524 529 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AP000676.4-201ENST00000624659 623 ntBASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
CDKL3Q8IVW4 AL359893.1-201ENST00000447628 1580 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDKL3Q8IVW4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDKL3Q8IVW4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDKL3Q8IVW4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDKL3Q8IVW4 SNORA14A-201ENST00000364773 135 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 CD24P4-201ENST00000382840 243 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 TANK-206ENST00000406287 875 ntTSL 5 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC073264.1-201ENST00000411508 416 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 RPL7P10-201ENST00000417407 739 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AL590639.1-201ENST00000456484 337 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 snoU13.3-201ENST00000459441 104 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 MTND2P31-201ENST00000512602 616 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 RNU6-488P-201ENST00000515918 99 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 SNORA31.1-201ENST00000515993 133 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 SNORA31.5-201ENST00000516190 133 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC007536.1-201ENST00000533382 349 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC104229.1-201ENST00000561364 255 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 EIF5A2P1-201ENST00000564027 460 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC079148.1-201ENST00000565944 819 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3□□□□□ -1.93
CDKL3Q8IVW4 FRG1HP-204ENST00000617940 757 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AC006249.1-201ENST00000621223 471 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AP003122.6-201ENST00000623831 495 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AP003400.6-201ENST00000624698 740 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AL109659.3-201ENST00000624985 950 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 AL590396.2-201ENST00000636511 1041 ntBASIC3□□□□□ -1.93
CDKL3Q8IVW4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CDKL3Q8IVW4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDKL3Q8IVW4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 RNU1-35P-201ENST00000362782 153 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 RNU6-837P-201ENST00000391056 108 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 RNU4-27P-201ENST00000410889 139 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC073310.1-201ENST00000423226 1033 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC091390.3-201ENST00000426478 338 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC093422.3-201ENST00000428506 305 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 RPL36P19-201ENST00000430744 301 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 RPL21P2-201ENST00000440049 481 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AL034418.1-201ENST00000448675 860 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 GAPDHP39-201ENST00000481866 979 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC026427.2-201ENST00000506228 536 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 MTND3P24-201ENST00000506306 329 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 SNORA31.20-201ENST00000517111 133 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC009812.2-201ENST00000517657 457 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 AC106734.1-201ENST00000568646 663 ntBASIC2.99□□□□□ -1.93
CDKL3Q8IVW4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms