Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 OR4G1P-201ENST00000588632 938 ntBASIC1.4□□□□□ -2.18
UBR4Q5T4S7 AP001521.1-201ENST00000609150 300 ntBASIC1.4□□□□□ -2.18
UBR4Q5T4S7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
UBR4Q5T4S7 SNORD13-201ENST00000459299 104 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 HMGN1P7-201ENST00000491722 313 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AC107222.1-201ENST00000510899 637 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 LRRC34P2-201ENST00000514850 553 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AL359511.1-201ENST00000402970 211 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 Z99714.1-201ENST00000450463 807 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AL590639.1-201ENST00000456484 337 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 RPL23AP49-201ENST00000492925 468 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AC106872.3-201ENST00000495104 446 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AC017037.1-201ENST00000508460 471 ntBASIC1.4□□□□□ -2.19
UBR4Q5T4S7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
UBR4Q5T4S7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 MIR548J-201ENST00000408833 112 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RPL30P2-201ENST00000414021 291 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AP001636.2-201ENST00000525517 696 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 SNORA67.3-201ENST00000384366 140 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RNA5SP146-201ENST00000410743 123 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 SETP7-201ENST00000552169 453 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC093010.3-201ENST00000570269 15214 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RNU6-72P-201ENST00000384285 79 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 MTND2P11-201ENST00000423638 648 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC018634.1-201ENST00000437554 401 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC004865.1-201ENST00000442276 1003 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RNA5SP330-201ENST00000517096 96 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 CR381670.1-201ENST00000624291 1693 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 MRPS36P1-201ENST00000421291 307 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RPS3AP50-201ENST00000487064 803 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 AC090819.1-201ENST00000523800 1111 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 SETP1-201ENST00000556014 845 ntBASIC1.39□□□□□ -2.19
UBR4Q5T4S7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
UBR4Q5T4S7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 OR52B1P-201ENST00000316506 909 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RNU1-108P-201ENST00000362556 161 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RNU6-283P-201ENST00000364788 107 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RNU1-139P-201ENST00000391307 165 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RPLP0P7-201ENST00000416050 667 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 ACTG1P13-201ENST00000486987 1043 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 CKS1BP7-201ENST00000522230 235 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 BX322635.1-201ENST00000605804 496 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 RN7SKP200-201ENST00000410564 320 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC092989.1-201ENST00000481235 277 ntBASIC1.38□□□□□ -2.19
UBR4Q5T4S7 AC006483.1-201ENST00000487308 313 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms