Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH11P55287 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 ZNF833P-201ENST00000424938 1494 ntBASIC3.55□□□□□ -1.84
CDH11P55287 NMD3P1-201ENST00000439704 1488 ntBASIC3.55□□□□□ -1.84
CDH11P55287 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 AC021755.1-201ENST00000559747 1447 ntBASIC3.55□□□□□ -1.84
CDH11P55287 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 MIR423-201ENST00000362201 94 ntBASIC3.55□□□□□ -1.84
CDH11P55287 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 MIR554-201ENST00000384874 96 ntBASIC3.55□□□□□ -1.84
CDH11P55287 MIR153-1-201ENST00000384914 90 ntBASIC3.55□□□□□ -1.84
CDH11P55287 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CDH11P55287 AC007066.1-201ENST00000392902 381 ntBASIC3.55□□□□□ -1.84
CDH11P55287 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.55□□□□□ -1.84
CDH11P55287 HSPE1P12-201ENST00000412576 301 ntBASIC3.55□□□□□ -1.84
CDH11P55287 RPS15AP38-201ENST00000413110 372 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 NPM1P11-201ENST00000417106 855 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC005517.2-201ENST00000424673 553 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL691449.1-201ENST00000426570 421 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL512649.1-201ENST00000428997 581 ntBASIC3.55□□□□□ -1.84
CDH11P55287 EZH2P1-201ENST00000431167 291 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 MUPP-201ENST00000438111 566 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH11P55287 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 RPS17P13-201ENST00000448974 407 ntBASIC3.55□□□□□ -1.84
CDH11P55287 MEMO1P3-201ENST00000459811 302 ntBASIC3.55□□□□□ -1.84
CDH11P55287 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 RPL21P103-201ENST00000479921 488 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 NDUFA5P2-201ENST00000519723 344 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH11P55287 OR8L1P-201ENST00000534005 955 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH11P55287 AC120057.2-201ENST00000571520 271 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 MTCYBP22-201ENST00000603788 447 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC025588.3-201ENST00000604182 274 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL022161.1-201ENST00000604390 213 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL034351.1-201ENST00000605288 668 ntBASIC3.55□□□□□ -1.84
CDH11P55287 BRDTP1-201ENST00000605735 677 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 AC099669.2-201ENST00000616549 437 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL713922.2-201ENST00000619384 716 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AL445264.1-201ENST00000621719 171 ntBASIC3.55□□□□□ -1.84
CDH11P55287 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 MIR6500-201ENST00000622700 86 ntBASIC3.55□□□□□ -1.84
CDH11P55287 AC091905.1-201ENST00000624400 311 ntBASIC3.55□□□□□ -1.84
CDH11P55287 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH11P55287 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH11P55287 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CDH11P55287 ELL2P3-201ENST00000457883 1602 ntBASIC3.55□□□□□ -1.84
CDH11P55287 ZNF734P-201ENST00000419494 1534 ntBASIC3.54□□□□□ -1.84
CDH11P55287 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CDH11P55287 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AL022578.1-201ENST00000439330 1433 ntBASIC3.54□□□□□ -1.84
CDH11P55287 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDH11P55287 NUP58P1-201ENST00000502546 1738 ntBASIC3.54□□□□□ -1.84
CDH11P55287 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH11P55287 AL359837.1-201ENST00000381357 287 ntBASIC3.54□□□□□ -1.84
CDH11P55287 U3.29-201ENST00000391296 212 ntBASIC3.54□□□□□ -1.84
CDH11P55287 HSPE1P8-201ENST00000406997 288 ntBASIC3.54□□□□□ -1.84
CDH11P55287 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH11P55287 RN7SKP202-201ENST00000410439 330 ntBASIC3.54□□□□□ -1.84
CDH11P55287 RHEBP3-201ENST00000411920 351 ntBASIC3.54□□□□□ -1.84
CDH11P55287 TPMTP3-201ENST00000411928 735 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH11P55287 MTCYBP24-201ENST00000420387 1106 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AC012065.2-201ENST00000421295 375 ntBASIC3.54□□□□□ -1.84
CDH11P55287 OR8F1P-201ENST00000425243 930 ntBASIC3.54□□□□□ -1.84
CDH11P55287 AC017083.1-201ENST00000428093 483 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms