Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL078604.1-201ENST00000404609 466 ntBASIC5.62□□□□□ -1.51
USP11P51784 RPL31P52-201ENST00000407532 367 ntBASIC5.62□□□□□ -1.51
USP11P51784 RNU4-26P-201ENST00000410270 107 ntBASIC5.62□□□□□ -1.51
USP11P51784 RNU6-193P-201ENST00000410977 107 ntBASIC5.62□□□□□ -1.51
USP11P51784 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.62□□□□□ -1.51
USP11P51784 AL031663.1-201ENST00000437445 219 ntBASIC5.62□□□□□ -1.51
USP11P51784 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.62□□□□□ -1.51
USP11P51784 AC079781.2-201ENST00000446424 169 ntBASIC5.62□□□□□ -1.51
USP11P51784 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 AL645937.3-201ENST00000453647 936 ntBASIC5.62□□□□□ -1.51
USP11P51784 snoU13.20-201ENST00000459180 104 ntBASIC5.62□□□□□ -1.51
USP11P51784 RN7SL517P-201ENST00000462240 305 ntBASIC5.62□□□□□ -1.51
USP11P51784 AC010301.1-201ENST00000473936 355 ntBASIC5.62□□□□□ -1.51
USP11P51784 RN7SL283P-201ENST00000489055 303 ntBASIC5.62□□□□□ -1.51
USP11P51784 AC025164.1-201ENST00000496249 478 ntBASIC5.62□□□□□ -1.51
USP11P51784 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 HSPD1P15-201ENST00000505573 1122 ntBASIC5.62□□□□□ -1.51
USP11P51784 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 RNU4-29P-201ENST00000515943 174 ntBASIC5.62□□□□□ -1.51
USP11P51784 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.62□□□□□ -1.51
USP11P51784 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.62□□□□□ -1.51
USP11P51784 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.62□□□□□ -1.51
USP11P51784 EDDM3DP-201ENST00000554692 434 ntBASIC5.62□□□□□ -1.51
USP11P51784 AC024940.4-201ENST00000605507 246 ntBASIC5.62□□□□□ -1.51
USP11P51784 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
USP11P51784 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP11P51784 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
USP11P51784 AC063976.2-201ENST00000425667 3556 ntBASIC5.62□□□□□ -1.51
USP11P51784 AC004817.4-201ENST00000602396 3625 ntBASIC5.62□□□□□ -1.51
USP11P51784 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
USP11P51784 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 RNU6-522P-201ENST00000364497 107 ntBASIC5.61□□□□□ -1.51
USP11P51784 Y_RNA.373-201ENST00000365600 103 ntBASIC5.61□□□□□ -1.51
USP11P51784 RNU6-38P-201ENST00000384085 107 ntBASIC5.61□□□□□ -1.51
USP11P51784 MT-TG-201ENST00000387429 68 ntBASIC5.61□□□□□ -1.51
USP11P51784 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 RPL7P60-201ENST00000397636 735 ntBASIC5.61□□□□□ -1.51
USP11P51784 EIF5P1-201ENST00000400019 1231 ntBASIC5.61□□□□□ -1.51
USP11P51784 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 RPS15AP12-201ENST00000419498 388 ntBASIC5.61□□□□□ -1.51
USP11P51784 AL590609.2-201ENST00000421430 368 ntBASIC5.61□□□□□ -1.51
USP11P51784 OR2AM1P-201ENST00000422137 422 ntBASIC5.61□□□□□ -1.51
USP11P51784 AC092832.1-201ENST00000422934 400 ntBASIC5.61□□□□□ -1.51
USP11P51784 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.61□□□□□ -1.51
USP11P51784 RPS26P40-201ENST00000435209 294 ntBASIC5.61□□□□□ -1.51
USP11P51784 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 RPL35AP21-201ENST00000437667 333 ntBASIC5.61□□□□□ -1.51
USP11P51784 RPL12P3-201ENST00000440080 396 ntBASIC5.61□□□□□ -1.51
USP11P51784 Z98949.2-201ENST00000440996 144 ntBASIC5.61□□□□□ -1.51
USP11P51784 AC112498.1-201ENST00000444401 332 ntBASIC5.61□□□□□ -1.51
USP11P51784 ELL2P4-201ENST00000446870 1376 ntBASIC5.61□□□□□ -1.51
USP11P51784 RPL23AP15-201ENST00000450202 459 ntBASIC5.61□□□□□ -1.51
USP11P51784 MRPS31P2-201ENST00000451581 518 ntBASIC5.61□□□□□ -1.51
USP11P51784 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 AL583843.1-201ENST00000456070 346 ntBASIC5.61□□□□□ -1.51
USP11P51784 RNU6-333P-201ENST00000459117 107 ntBASIC5.61□□□□□ -1.51
USP11P51784 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 SMURF2P1-201ENST00000514992 481 ntBASIC5.61□□□□□ -1.51
USP11P51784 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.61□□□□□ -1.51
USP11P51784 RNU6-410P-201ENST00000517006 107 ntBASIC5.61□□□□□ -1.51
USP11P51784 AP001922.4-201ENST00000526967 290 ntBASIC5.61□□□□□ -1.51
USP11P51784 OR5D15P-201ENST00000531671 942 ntBASIC5.61□□□□□ -1.51
USP11P51784 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.61□□□□□ -1.51
USP11P51784 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.61□□□□□ -1.51
USP11P51784 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.61□□□□□ -1.51
USP11P51784 OR1F2P-201ENST00000570470 933 ntBASIC5.61□□□□□ -1.51
USP11P51784 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.61□□□□□ -1.51
USP11P51784 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.61□□□□□ -1.51
USP11P51784 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.61□□□□□ -1.51
USP11P51784 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 NUTF2P8-201ENST00000604593 363 ntBASIC5.61□□□□□ -1.51
USP11P51784 CR381572.2-201ENST00000624852 397 ntBASIC5.61□□□□□ -1.51
USP11P51784 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.61□□□□□ -1.51
USP11P51784 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.61□□□□□ -1.51
USP11P51784 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
USP11P51784 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
USP11P51784 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP11P51784 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.6□□□□□ -1.51
USP11P51784 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 AC099654.2-201ENST00000433031 1980 ntBASIC5.6□□□□□ -1.51
USP11P51784 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms