Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC091885.1-201ENST00000506658 268 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.84□□□□□ -1.63
HOXC12P31275 AC122688.1-201ENST00000541494 223 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 DYNLL1P4-201ENST00000549314 266 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 AL161729.3-201ENST00000603533 673 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 MIR1302-2-201ENST00000607096 138 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 CYP4F35P-202ENST00000636121 390 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC12P31275 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 MAPK10-349ENST00000641767 3661 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC12P31275 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC12P31275 OR14L1P-202ENST00000641545 3009 ntBASIC4.84□□□□□ -1.63
HOXC12P31275 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HOXC12P31275 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HOXC12P31275 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.64
HOXC12P31275 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC12P31275 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 RNA5SP326-201ENST00000363209 110 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 Y_RNA.184-201ENST00000363884 108 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC12P31275 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 ADAM24P-201ENST00000398655 2101 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 RN7SKP140-201ENST00000411196 284 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 AL354868.1-201ENST00000417077 482 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC018644.1-201ENST00000429934 551 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC12P31275 HMGB1P18-201ENST00000438801 619 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 RPL21P133-201ENST00000443666 476 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 snoU13.29-201ENST00000459370 104 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC117522.3-201ENST00000507974 584 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC12P31275 AP000676.2-201ENST00000529711 301 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC024940.3-201ENST00000538551 316 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC12P31275 AC011155.2-201ENST00000623202 216 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC025034.2-201ENST00000623264 286 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC12P31275 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC12P31275 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 BDP1P-201ENST00000582658 1990 ntBASIC4.83□□□□□ -1.64
HOXC12P31275 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC12P31275 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
HOXC12P31275 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC12P31275 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC12P31275 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC12P31275 GABPAP-201ENST00000419271 1356 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AL139276.1-201ENST00000311910 1001 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 RPL23P2-201ENST00000320371 421 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 Y_RNA.100-201ENST00000363141 102 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 RN7SKP103-201ENST00000363848 320 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HOXC12P31275 RNA5SP187-201ENST00000384400 119 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 RNU6-831P-201ENST00000384548 107 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXC12P31275 AL356967.1-201ENST00000406305 431 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC12P31275 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 RPL21P24-201ENST00000413752 448 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AL451054.2-201ENST00000420896 202 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC093106.2-201ENST00000428212 385 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC005534.2-201ENST00000431047 433 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 CYCSP6-201ENST00000434498 302 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 PSMD10P3-201ENST00000437000 448 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC019185.1-201ENST00000442718 389 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AL031584.1-201ENST00000447169 754 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 SNRPFP3-201ENST00000457792 225 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC079804.1-201ENST00000461922 436 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXC12P31275 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC12P31275 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC12P31275 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC12P31275 RPL7P20-201ENST00000520308 745 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms