Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH3P22223 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
CDH3P22223 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH3P22223 MIR3158-1-201ENST00000583596 81 ntBASIC3.67□□□□□ -1.82
CDH3P22223 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH3P22223 AC021171.1-201ENST00000603137 706 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AL365503.1-201ENST00000605247 905 ntBASIC3.67□□□□□ -1.82
CDH3P22223 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.67□□□□□ -1.82
CDH3P22223 Z99129.2-201ENST00000619967 314 ntBASIC3.67□□□□□ -1.82
CDH3P22223 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH3P22223 AL359893.1-201ENST00000447628 1580 ntBASIC3.67□□□□□ -1.82
CDH3P22223 AC007256.1-201ENST00000392253 2765 ntBASIC3.67□□□□□ -1.82
CDH3P22223 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH3P22223 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH3P22223 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH3P22223 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH3P22223 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH3P22223 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDH3P22223 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH3P22223 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDH3P22223 AC016769.3-201ENST00000396562 315 ntBASIC3.66□□□□□ -1.82
CDH3P22223 ATP5F1P3-201ENST00000397213 657 ntBASIC3.66□□□□□ -1.82
CDH3P22223 SNRPEP2-201ENST00000397592 279 ntBASIC3.66□□□□□ -1.82
CDH3P22223 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH3P22223 RAP1BP1-201ENST00000412709 553 ntBASIC3.66□□□□□ -1.82
CDH3P22223 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AC104978.1-201ENST00000449387 391 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH3P22223 AP000563.1-201ENST00000490865 758 ntBASIC3.66□□□□□ -1.82
CDH3P22223 RPL23AP55-201ENST00000498163 452 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH3P22223 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH3P22223 RNU6-1129P-201ENST00000515964 104 ntBASIC3.66□□□□□ -1.82
CDH3P22223 SNORA67.7-201ENST00000516664 135 ntBASIC3.66□□□□□ -1.82
CDH3P22223 SCARNA14-201ENST00000516903 136 ntBASIC3.66□□□□□ -1.82
CDH3P22223 TRMT10BP1-201ENST00000519377 943 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH3P22223 AP001636.2-201ENST00000525517 696 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH3P22223 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CDH3P22223 AC008127.2-201ENST00000549925 1075 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AL512347.1-201ENST00000566420 503 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH3P22223 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AC007566.2-201ENST00000603642 413 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC025811.1-201ENST00000604312 472 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AL121772.2-201ENST00000614331 297 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH3P22223 AC091304.6-201ENST00000619761 202 ntBASIC3.66□□□□□ -1.82
CDH3P22223 AC079416.3-201ENST00000624479 549 ntBASIC3.66□□□□□ -1.82
CDH3P22223 MIR7153-201ENST00000637758 57 ntBASIC3.66□□□□□ -1.82
CDH3P22223 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH3P22223 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
CDH3P22223 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH3P22223 ZNF542P-204ENST00000482727 1305 ntBASIC3.66□□□□□ -1.82
CDH3P22223 MTND5P24-201ENST00000438892 1767 ntBASIC3.66□□□□□ -1.82
CDH3P22223 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH3P22223 AP000526.1-201ENST00000603308 1388 ntBASIC3.65□□□□□ -1.82
CDH3P22223 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDH3P22223 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH3P22223 RNA5SP124-201ENST00000362739 110 ntBASIC3.65□□□□□ -1.83
CDH3P22223 RNU6-931P-201ENST00000363850 107 ntBASIC3.65□□□□□ -1.83
CDH3P22223 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 RNU6-1122P-201ENST00000384449 107 ntBASIC3.65□□□□□ -1.83
CDH3P22223 MIR1284-201ENST00000408337 120 ntBASIC3.65□□□□□ -1.83
CDH3P22223 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.65□□□□□ -1.83
CDH3P22223 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 AIMP1P1-201ENST00000418670 937 ntBASIC3.65□□□□□ -1.83
CDH3P22223 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
CDH3P22223 RPL31P12-201ENST00000422587 358 ntBASIC3.65□□□□□ -1.83
CDH3P22223 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH3P22223 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 GOT2P5-201ENST00000433995 546 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 YWHAZP7-201ENST00000436906 631 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AC092427.1-201ENST00000439177 601 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 RPL39P6-201ENST00000448289 150 ntBASIC3.65□□□□□ -1.83
CDH3P22223 RSL24D1P3-201ENST00000449255 495 ntBASIC3.65□□□□□ -1.83
CDH3P22223 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 DNAJC19P1-201ENST00000455312 319 ntBASIC3.65□□□□□ -1.83
CDH3P22223 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH3P22223 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 AC108941.1-201ENST00000502853 530 ntBASIC3.65□□□□□ -1.83
CDH3P22223 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 HSPE1P23-201ENST00000509838 286 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms