Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NFKB1P19838 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 ZNF33CP-201ENST00000432492 2030 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.6□□□□□ -1.51
NFKB1P19838 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 AC032011.1-201ENST00000611703 1549 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 RNU6-874P-201ENST00000362390 105 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 RNA5SP391-201ENST00000363456 119 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 Y_RNA.473-201ENST00000384333 102 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 Y_RNA.512-201ENST00000384518 102 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 MIR551A-201ENST00000385042 96 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AL583834.1-201ENST00000406943 343 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 RNU2-15P-201ENST00000410692 191 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.6□□□□□ -1.51
NFKB1P19838 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.6□□□□□ -1.51
NFKB1P19838 AC069213.2-201ENST00000420238 366 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.6□□□□□ -1.51
NFKB1P19838 AL354766.1-201ENST00000423396 542 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 CALM2P2-201ENST00000428512 440 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.6□□□□□ -1.51
NFKB1P19838 AC092162.1-201ENST00000432828 434 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AC064862.4-201ENST00000442180 334 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 MTCO3P45-201ENST00000443036 613 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.6□□□□□ -1.51
NFKB1P19838 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.6□□□□□ -1.51
NFKB1P19838 RNU6-408P-201ENST00000515910 100 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.6□□□□□ -1.51
NFKB1P19838 DYNLL1P4-201ENST00000549314 266 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AL049872.1-201ENST00000556323 322 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.6□□□□□ -1.51
NFKB1P19838 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 MIR3941-201ENST00000582572 103 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 MIR5692C1-201ENST00000585309 91 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NFKB1P19838 AC012616.1-201ENST00000600294 197 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AL355297.3-201ENST00000604082 446 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AL031320.1-201ENST00000604177 357 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 ATP1B3P1-201ENST00000605365 821 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 AC138627.2-201ENST00000624202 601 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 LINC01963-201ENST00000562038 3148 ntBASIC5.6□□□□□ -1.51
NFKB1P19838 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NFKB1P19838 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NFKB1P19838 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NFKB1P19838 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
NFKB1P19838 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NFKB1P19838 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.59□□□□□ -1.51
NFKB1P19838 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 RNU1-130P-201ENST00000363930 160 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 RNU6-266P-201ENST00000364225 107 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 RNU6-450P-201ENST00000364654 107 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NFKB1P19838 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 Y_RNA.396-201ENST00000383949 103 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 RNU6-823P-201ENST00000391042 103 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.59□□□□□ -1.51
NFKB1P19838 RNA5SP107-201ENST00000411358 122 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 OR6E1P-201ENST00000414424 923 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 BMS1P17-202ENST00000416720 316 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 EIF4EP1-201ENST00000422311 642 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.59□□□□□ -1.51
NFKB1P19838 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.59□□□□□ -1.51
NFKB1P19838 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.59□□□□□ -1.51
NFKB1P19838 COX7A2P2-201ENST00000505291 250 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 AC091912.1-201ENST00000511351 248 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 RNU6-685P-201ENST00000517088 95 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.59□□□□□ -1.51
NFKB1P19838 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.59□□□□□ -1.51
NFKB1P19838 AC106782.4-201ENST00000568264 210 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.59□□□□□ -1.51
NFKB1P19838 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.59□□□□□ -1.51
NFKB1P19838 AP000769.2-201ENST00000602344 396 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 PSMA6P4-201ENST00000603247 718 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 AC092447.9-201ENST00000603395 144 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 U2.17-201ENST00000611454 95 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.59□□□□□ -1.51
NFKB1P19838 AL118522.2-201ENST00000616045 615 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 CU639417.4-201ENST00000623928 207 ntBASIC5.59□□□□□ -1.51
NFKB1P19838 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.59□□□□□ -1.51
NFKB1P19838 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.59□□□□□ -1.51
NFKB1P19838 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NFKB1P19838 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NFKB1P19838 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms