Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL109755.1-201ENST00000401791 649 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 RNA5SP113-201ENST00000410486 84 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 RPL12P9-201ENST00000412942 488 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 RPL21P24-201ENST00000413752 448 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 SSXP9-201ENST00000417503 292 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.79□□□□□ -1.48
ERCC3P19447 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.79□□□□□ -1.48
ERCC3P19447 AC083798.1-201ENST00000472671 131 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 RN7SL481P-201ENST00000477764 299 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC018710.1-201ENST00000506509 158 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 RNU6-390P-201ENST00000516259 103 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 AC123904.3-201ENST00000547218 814 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC125611.2-201ENST00000551907 647 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC3P19447 AC012417.1-201ENST00000582307 1039 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC068790.4-201ENST00000602474 263 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AL121992.2-201ENST00000606262 256 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AP001521.2-201ENST00000608772 546 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC093838.1-201ENST00000613014 469 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AL731566.2-201ENST00000618971 317 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 DUXAP9-208ENST00000622815 614 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AC005609.4-201ENST00000625071 447 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.79□□□□□ -1.48
ERCC3P19447 DDX10P1-201ENST00000448545 1933 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ERCC3P19447 CKAP2P1-201ENST00000555477 2049 ntBASIC5.79□□□□□ -1.48
ERCC3P19447 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ERCC3P19447 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ERCC3P19447 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ERCC3P19447 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 SNORD3H-201ENST00000384486 214 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 MIR135A2-201ENST00000384854 100 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ERCC3P19447 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 FGF7P8-201ENST00000402994 292 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 AL136372.1-201ENST00000403060 228 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC005008.1-201ENST00000456151 612 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 AC093278.1-201ENST00000494700 600 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC008628.2-201ENST00000502605 298 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 STMN1P2-201ENST00000508435 439 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC3P19447 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC3P19447 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.78□□□□□ -1.48
ERCC3P19447 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC3P19447 AL391358.1-201ENST00000605342 190 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 LARP7P1-201ENST00000605576 316 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 AC069234.5-201ENST00000611056 416 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 Y_RNA.804-201ENST00000615262 101 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.78□□□□□ -1.48
ERCC3P19447 AC073869.10-201ENST00000642016 354 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 SAMMSON-226ENST00000642089 1582 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ERCC3P19447 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC3P19447 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ERCC3P19447 ADAM5-202ENST00000399789 1942 ntBASIC5.78□□□□□ -1.48
ERCC3P19447 OR14L1P-202ENST00000641545 3009 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 LINC01109-201ENST00000603837 3081 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 RNU2-36P-201ENST00000410361 191 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC119751.6-201ENST00000416712 186 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 SDCBPP3-201ENST00000419629 891 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC093414.1-201ENST00000434712 514 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC016691.1-201ENST00000441321 413 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms