Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC233728.2-201ENST00000425348 757 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 MTND4LP10-201ENST00000435146 291 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 LSM1P1-201ENST00000438629 273 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 UBE2V1P7-201ENST00000446395 340 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 USP9YP12-201ENST00000450481 570 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 MTND2P24-201ENST00000453434 806 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 MEMO1P3-201ENST00000459811 302 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 RPL21P71-201ENST00000465598 459 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 RN7SL271P-201ENST00000487601 295 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 SNORA18.6-201ENST00000516792 115 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 RNU6-430P-201ENST00000517078 107 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 RNA5SP179-201ENST00000517284 121 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AP000859.1-201ENST00000525536 307 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AP000790.1-201ENST00000528891 737 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC137800.2-201ENST00000574375 120 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 BNIP3P23-201ENST00000599655 511 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC090578.1-201ENST00000604955 591 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC091167.4-201ENST00000605079 184 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC097468.3-201ENST00000607956 456 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 MIR6863-201ENST00000636112 90 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DOAP06340 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DOAP06340 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DOAP06340 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DOAP06340 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 RNU6-462P-201ENST00000362659 105 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 RNA5SP97-201ENST00000365006 84 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 Y_RNA.450-201ENST00000384198 113 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 RNU6-809P-201ENST00000384461 107 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 PTMAP2-201ENST00000397627 327 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 CALM2P3-201ENST00000400429 449 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL121972.1-201ENST00000402023 252 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL590704.1-201ENST00000402856 794 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL590002.1-201ENST00000406554 418 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC009237.5-201ENST00000414271 501 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 MTND4P28-201ENST00000426217 387 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 NPM1P24-201ENST00000428039 894 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL445584.1-201ENST00000431451 330 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL358934.1-201ENST00000432346 324 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 RPL37P21-201ENST00000435890 276 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AL451074.3-201ENST00000437709 472 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 FABP3P2-201ENST00000453169 399 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC006511.1-201ENST00000470614 315 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC117522.1-201ENST00000509821 380 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AK6P1-201ENST00000540219 478 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 CYCSP30-201ENST00000546447 172 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 VN1R79P-201ENST00000593540 513 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 PRELID3BP8-201ENST00000604148 295 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 MIR432-201ENST00000606207 94 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC006338.1-201ENST00000618453 749 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 AC068880.5-201ENST00000624331 290 ntBASIC4.73□□□□□ -1.65
HLA-DOAP06340 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DOAP06340 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DOAP06340 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DOAP06340 DCAF13P1-201ENST00000495256 1330 ntBASIC4.72□□□□□ -1.65
HLA-DOAP06340 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DOAP06340 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DOAP06340 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms