Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CABYRP1-201ENST00000465493 1045 ntBASIC2.54□□□□□ -2
OPN1SWP03999 AL136126.1-201ENST00000473603 402 ntBASIC2.54□□□□□ -2
OPN1SWP03999 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.54□□□□□ -2
OPN1SWP03999 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.54□□□□□ -2
OPN1SWP03999 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.54□□□□□ -2
OPN1SWP03999 HMGB1P22-201ENST00000505315 124 ntBASIC2.54□□□□□ -2
OPN1SWP03999 AC111000.2-201ENST00000507775 550 ntBASIC2.54□□□□□ -2
OPN1SWP03999 KLHL2P1-201ENST00000508691 521 ntBASIC2.54□□□□□ -2
OPN1SWP03999 AC010374.2-201ENST00000512933 535 ntBASIC2.54□□□□□ -2
OPN1SWP03999 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.54□□□□□ -2
OPN1SWP03999 SCARNA13-201ENST00000516672 275 ntBASIC2.54□□□□□ -2
OPN1SWP03999 SNORD59.2-201ENST00000516873 68 ntBASIC2.54□□□□□ -2
OPN1SWP03999 SETP2-201ENST00000553886 926 ntBASIC2.54□□□□□ -2
OPN1SWP03999 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
OPN1SWP03999 MTCO3P13-201ENST00000577757 781 ntBASIC2.54□□□□□ -2
OPN1SWP03999 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.54□□□□□ -2
OPN1SWP03999 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
OPN1SWP03999 AC004775.1-201ENST00000607389 753 ntBASIC2.54□□□□□ -2
OPN1SWP03999 CYCSP41-201ENST00000616920 296 ntBASIC2.54□□□□□ -2
OPN1SWP03999 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
OPN1SWP03999 AC020923.1-201ENST00000624021 917 ntBASIC2.54□□□□□ -2
OPN1SWP03999 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
OPN1SWP03999 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
OPN1SWP03999 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
OPN1SWP03999 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.53□□□□□ -2
OPN1SWP03999 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 AC109315.1-201ENST00000584143 1347 ntBASIC2.53□□□□□ -2
OPN1SWP03999 AC016716.1-201ENST00000265882 708 ntBASIC2.53□□□□□ -2
OPN1SWP03999 RNU6-252P-201ENST00000363232 107 ntBASIC2.53□□□□□ -2
OPN1SWP03999 RNU6-1181P-201ENST00000384191 106 ntBASIC2.53□□□□□ -2
OPN1SWP03999 RNU6-851P-201ENST00000384565 107 ntBASIC2.53□□□□□ -2
OPN1SWP03999 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
OPN1SWP03999 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
OPN1SWP03999 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 MRPL50P2-201ENST00000416821 482 ntBASIC2.53□□□□□ -2
OPN1SWP03999 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.53□□□□□ -2
OPN1SWP03999 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
OPN1SWP03999 RPL36AP6-201ENST00000435770 321 ntBASIC2.53□□□□□ -2
OPN1SWP03999 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 MTND5P8-201ENST00000449817 1083 ntBASIC2.53□□□□□ -2
OPN1SWP03999 AC140076.1-201ENST00000449897 361 ntBASIC2.53□□□□□ -2
OPN1SWP03999 OR6K1P-201ENST00000456766 971 ntBASIC2.53□□□□□ -2
OPN1SWP03999 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.53□□□□□ -2
OPN1SWP03999 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.53□□□□□ -2
OPN1SWP03999 AC008885.2-201ENST00000509506 930 ntBASIC2.53□□□□□ -2
OPN1SWP03999 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.53□□□□□ -2
OPN1SWP03999 AC107954.1-201ENST00000565906 727 ntBASIC2.53□□□□□ -2
OPN1SWP03999 MIR4504-201ENST00000577413 92 ntBASIC2.53□□□□□ -2
OPN1SWP03999 OR4G1P-201ENST00000588632 938 ntBASIC2.53□□□□□ -2
OPN1SWP03999 AL590282.1-201ENST00000610379 1136 ntBASIC2.53□□□□□ -2
OPN1SWP03999 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.53□□□□□ -2
OPN1SWP03999 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
OPN1SWP03999 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.53□□□□□ -2
OPN1SWP03999 AC092447.7-201ENST00000422212 1621 ntBASIC2.53□□□□□ -2
OPN1SWP03999 AC073055.1-201ENST00000456901 1621 ntBASIC2.53□□□□□ -2
OPN1SWP03999 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.52□□□□□ -2.01
OPN1SWP03999 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
OPN1SWP03999 AL645568.2-201ENST00000432815 1337 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC104446.1-201ENST00000613728 1321 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
OPN1SWP03999 RNU6-543P-201ENST00000362576 108 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RNU6-883P-201ENST00000384597 107 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 MIR634-201ENST00000385208 97 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL21P75-201ENST00000396599 483 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 DSTNP4-201ENST00000399472 474 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL21P28-201ENST00000401418 483 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AL592114.1-201ENST00000403842 483 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC073264.1-201ENST00000411508 416 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 EEF1A1P41-201ENST00000414667 207 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.52□□□□□ -2.01
OPN1SWP03999 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL35AP12-201ENST00000425362 338 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.52□□□□□ -2.01
OPN1SWP03999 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.52□□□□□ -2.01
OPN1SWP03999 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL39P40-201ENST00000445481 146 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 NANOGNBP1-201ENST00000448444 480 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL23AP23-201ENST00000452590 471 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 NPM1P13-201ENST00000452663 865 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPS24P6-201ENST00000452670 400 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 NECAP1P2-201ENST00000455668 727 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL21P39-201ENST00000463605 483 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC011979.1-201ENST00000472300 483 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL21P93-201ENST00000480465 489 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC233702.1-201ENST00000482905 502 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC087190.1-201ENST00000484462 480 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AC093591.1-201ENST00000491435 481 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 AL024509.2-201ENST00000493462 493 ntBASIC2.52□□□□□ -2.01
OPN1SWP03999 RPL21P16-201ENST00000495531 483 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms