Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 BX649567.1-201ENST00000642071 1134 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND4P03905 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MT-ND4P03905 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 ZNF807-201ENST00000328088 1707 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.99
MT-ND4P03905 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND4P03905 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
MT-ND4P03905 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
MT-ND4P03905 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 OR1S2-201ENST00000302592 978 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND4P03905 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
MT-ND4P03905 RNVU1-3-201ENST00000364313 161 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 SNORA62.3-201ENST00000365110 153 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND4P03905 RNU6-761P-201ENST00000384148 107 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
MT-ND4P03905 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC063979.1-201ENST00000415539 377 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 RPS7P15-201ENST00000415804 584 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND4P03905 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.64□□□□□ -1.99
MT-ND4P03905 AL035410.1-201ENST00000427409 427 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC006548.1-201ENST00000427470 102 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 RPL21P2-201ENST00000440049 481 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.64□□□□□ -1.99
MT-ND4P03905 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND4P03905 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 GAPDHP39-201ENST00000481866 979 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND4P03905 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC111000.2-201ENST00000507775 550 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC008628.1-201ENST00000508663 265 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 MTCYBP37-201ENST00000510642 1133 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 SNORA31.1-201ENST00000515993 133 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 SNORA31.5-201ENST00000516190 133 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC113192.3-201ENST00000529152 742 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.64□□□□□ -1.99
MT-ND4P03905 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC006518.2-201ENST00000542513 940 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC023043.3-201ENST00000593113 385 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 CKS1BP3-201ENST00000600888 237 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AL627309.6-201ENST00000606857 840 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.64□□□□□ -1.99
MT-ND4P03905 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 CR381572.1-201ENST00000625098 102 ntBASIC2.64□□□□□ -1.99
MT-ND4P03905 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND4P03905 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.64□□□□□ -1.99
MT-ND4P03905 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MT-ND4P03905 AC130650.2-201ENST00000618736 2403 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND4P03905 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
MT-ND4P03905 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND4P03905 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MT-ND4P03905 RNA5SP258-201ENST00000362750 119 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 Y_RNA.110-201ENST00000363220 99 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 RNU6-730P-201ENST00000383954 104 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 SNORA26.7-201ENST00000391288 122 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 MTND4LP20-201ENST00000402379 270 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 MTCO2P31-201ENST00000402702 684 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL451074.5-201ENST00000415894 435 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 RPL7P10-201ENST00000417407 739 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 SSXP9-201ENST00000417503 292 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 SFR1P2-201ENST00000421841 730 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND4P03905 RPL31P54-201ENST00000429803 370 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC097713.2-201ENST00000430199 356 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL512637.2-201ENST00000431287 1256 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 SNRPEP4-201ENST00000435815 279 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC000041.1-201ENST00000439655 175 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.63□□□□□ -1.99
MT-ND4P03905 RPL23AP58-201ENST00000440453 469 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
MT-ND4P03905 COX6CP2-201ENST00000444980 225 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC044797.1-201ENST00000445744 679 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC008155.2-201ENST00000464337 397 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 RN7SL499P-201ENST00000481141 276 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND4P03905 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC118282.2-201ENST00000508739 374 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC048346.1-201ENST00000510247 144 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 RN7SKP157-201ENST00000516174 282 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.63□□□□□ -1.99
MT-ND4P03905 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC022690.1-201ENST00000526681 550 ntBASIC2.63□□□□□ -1.99
MT-ND4P03905 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.63□□□□□ -1.99
MT-ND4P03905 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms