Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1AO95602 MTND5P28-201ENST00000438005 1594 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
POLR1AO95602 AC011460.1-201ENST00000636268 1834 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1AO95602 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1AO95602 AL356292.1-201ENST00000283110 373 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 Y_RNA.269-201ENST00000364685 89 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AL023284.1-201ENST00000403956 276 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AL138785.1-201ENST00000425821 331 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 SCARNA17.1-201ENST00000516211 143 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 SCARNA17.2-201ENST00000516334 143 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AC011494.1-201ENST00000596454 237 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AP003117.2-201ENST00000606010 545 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 CR589904.2-201ENST00000612533 440 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 SCARNA17.4-201ENST00000614296 143 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AL160394.1-201ENST00000624765 724 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1AO95602 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1AO95602 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1AO95602 Y_RNA.466-201ENST00000384294 113 ntBASIC3.32□□□□□ -1.88
POLR1AO95602 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1AO95602 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1AO95602 MTATP6P11-201ENST00000428071 670 ntBASIC3.32□□□□□ -1.88
POLR1AO95602 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1AO95602 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1AO95602 MTCYBP20-201ENST00000524239 1129 ntBASIC3.32□□□□□ -1.88
POLR1AO95602 MIR4781-201ENST00000585250 76 ntBASIC3.32□□□□□ -1.88
POLR1AO95602 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1AO95602 CYP3A51P-201ENST00000633513 256 ntBASIC3.32□□□□□ -1.88
POLR1AO95602 AL512283.1-201ENST00000606756 1384 ntBASIC3.32□□□□□ -1.88
POLR1AO95602 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1AO95602 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1AO95602 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
POLR1AO95602 AC007390.1-201ENST00000415722 356 ntBASIC3.31□□□□□ -1.88
POLR1AO95602 AC048351.1-201ENST00000420064 602 ntBASIC3.31□□□□□ -1.88
POLR1AO95602 AC124916.1-201ENST00000444020 547 ntBASIC3.31□□□□□ -1.88
POLR1AO95602 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR1AO95602 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1AO95602 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1AO95602 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1AO95602 AC009570.1-201ENST00000609599 745 ntBASIC3.31□□□□□ -1.88
POLR1AO95602 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1AO95602 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1AO95602 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR1AO95602 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1AO95602 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.3□□□□□ -1.88
POLR1AO95602 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1AO95602 UBE2V2P4-201ENST00000447495 259 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
POLR1AO95602 RNU6-295P-201ENST00000516901 104 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 SNRPGP18-201ENST00000553000 214 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 snoU13.31-201ENST00000607291 104 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
POLR1AO95602 MTND5P7-201ENST00000413558 1798 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 RNU1-138P-201ENST00000384093 164 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 SNORA26.7-201ENST00000391288 122 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 AC009414.1-201ENST00000427200 443 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 AC018634.1-201ENST00000437554 401 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 MTCO3P11-201ENST00000455103 774 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 OR4U1P-201ENST00000554958 912 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1AO95602 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1AO95602 AL022099.1-201ENST00000604551 712 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 AC067747.1-201ENST00000608026 250 ntBASIC3.3□□□□□ -1.88
POLR1AO95602 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1AO95602 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1AO95602 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1AO95602 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR1AO95602 AL359893.1-201ENST00000447628 1580 ntBASIC3.29□□□□□ -1.88
POLR1AO95602 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1AO95602 SNORA62.2-201ENST00000364672 152 ntBASIC3.29□□□□□ -1.88
POLR1AO95602 RNA5SP213-201ENST00000391031 106 ntBASIC3.29□□□□□ -1.88
POLR1AO95602 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR1AO95602 AC087385.1-201ENST00000475062 312 ntBASIC3.29□□□□□ -1.88
POLR1AO95602 SNORA31.15-201ENST00000516771 132 ntBASIC3.29□□□□□ -1.88
POLR1AO95602 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR1AO95602 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR1AO95602 AC097714.1-201ENST00000511272 1647 ntBASIC3.29□□□□□ -1.88
POLR1AO95602 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1AO95602 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1AO95602 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1AO95602 AC108667.1-201ENST00000428618 249 ntBASIC3.28□□□□□ -1.88
POLR1AO95602 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR1AO95602 AC011816.1-201ENST00000441346 546 ntBASIC3.28□□□□□ -1.88
POLR1AO95602 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1AO95602 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1AO95602 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.28□□□□□ -1.88
POLR1AO95602 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR1AO95602 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR1AO95602 AL450338.1-201ENST00000407987 512 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1AO95602 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.27□□□□□ -1.89
POLR1AO95602 NPM1P49-201ENST00000448027 714 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 XKRY-201ENST00000510392 1100 ntBASIC3.27□□□□□ -1.89
POLR1AO95602 AC025881.1-201ENST00000518851 512 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms