Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNU6-33P-201ENST00000384793 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RPS24P8-201ENST00000431490 402 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC126182.1-201ENST00000478134 357 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-6P-201ENST00000606623 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 Z99496.1-201ENST00000469424 1477 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 Y_RNA.191-201ENST00000363972 113 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-457P-201ENST00000363999 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 SNORA67.3-201ENST00000384366 140 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AL020991.1-201ENST00000612314 373 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 FRG1DP-201ENST00000635586 771 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AL390023.1-201ENST00000428836 262 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 PPIAP17-201ENST00000438507 471 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AL731537.2-201ENST00000561565 951 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AC004925.1-201ENST00000624256 2706 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 XKRY-201ENST00000510392 1100 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 AC090819.1-201ENST00000523800 1111 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 PSMA3P-201ENST00000555485 635 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 MIR6504-201ENST00000613520 61 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 MIR6766-201ENST00000622641 72 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
CNOT1A5YKK6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT1A5YKK6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 SNORD6-201ENST00000365444 73 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 BTF3P4-201ENST00000418852 495 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 AL357520.1-201ENST00000441557 453 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 VN1R17P-201ENST00000472048 1090 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 AC093278.1-201ENST00000494700 600 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 AC147055.1-201ENST00000509261 750 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 TXNP6-201ENST00000510190 310 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 SNORA9.3-201ENST00000516383 129 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.15□□□□□ -2.06
CNOT1A5YKK6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
CNOT1A5YKK6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AL163540.1-201ENST00000485382 386 ntBASIC2.15□□□□□ -2.07
CNOT1A5YKK6 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AC068339.2-201ENST00000534395 618 ntBASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AC092851.1-201ENST00000535964 478 ntBASIC2.15□□□□□ -2.07
CNOT1A5YKK6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CNOT1A5YKK6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 MTCO3P31-201ENST00000405526 789 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 UBE2V1P5-201ENST00000440070 405 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AC103710.1-201ENST00000610003 901 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 PHKBP1-201ENST00000450951 1951 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 RNU1-87P-201ENST00000363727 170 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 RPL23AP76-201ENST00000441860 458 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms