Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL121672.3-201ENST00000608644 468 ntBASIC29.07■■■□□ 2.24
CDC42BPBQ9Y5S2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC29.07■■■□□ 2.24
CDC42BPBQ9Y5S2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AL031008.1-201ENST00000619963 541 ntBASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AP000347.1-202ENST00000435868 847 ntBASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 BX276092.5-203ENST00000456199 560 ntBASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC29.06■■■□□ 2.24
CDC42BPBQ9Y5S2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 CHCHD2P8-201ENST00000429873 447 ntBASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CDC42BPBQ9Y5S2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 AL162741.1-201ENST00000565563 1558 ntBASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 AC079781.3-201ENST00000449110 356 ntBASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC29.04■■■□□ 2.24
CDC42BPBQ9Y5S2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 TSSC2-201ENST00000450217 709 ntBASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 MIR3180-5-201ENST00000583743 153 ntBASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 AL157888.1-201ENST00000631930 593 ntBASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPBQ9Y5S2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 AC024243.1-201ENST00000609234 778 ntBASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 GABARAPL3-202ENST00000624044 1851 ntBASIC29.02■■■□□ 2.24
CDC42BPBQ9Y5S2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC29.01■■■□□ 2.24
CDC42BPBQ9Y5S2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
CDC42BPBQ9Y5S2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 SDHAP1-207ENST00000440850 2000 ntBASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPBQ9Y5S2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 AC004870.1-201ENST00000315132 882 ntBASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 AP002414.4-201ENST00000589764 1148 ntBASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 AC012615.1-201ENST00000565797 1299 ntBASIC29■■■□□ 2.23
CDC42BPBQ9Y5S2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPBQ9Y5S2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPBQ9Y5S2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPBQ9Y5S2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
CDC42BPBQ9Y5S2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC28.99■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms