Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 AL355355.2-201ENST00000442321 338 ntBASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 NUDT16P1-203ENST00000513809 620 ntBASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 AC026471.5-201ENST00000615068 467 ntBASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAI2Q9Y5P3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 KRT8P41-201ENST00000533985 1514 ntBASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 AL032819.2-201ENST00000624543 2162 ntBASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 RCC2P6-201ENST00000526625 1557 ntBASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
RAI2Q9Y5P3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 AC011506.1-201ENST00000474329 610 ntBASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 MIR6786-201ENST00000616843 113 ntBASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 AC005332.7-201ENST00000614046 2005 ntBASIC19.41■□□□□ 0.7
RAI2Q9Y5P3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 MESTP1-201ENST00000404287 994 ntBASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 AC004951.3-201ENST00000418645 1148 ntBASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 B3GAT3P1-201ENST00000471720 806 ntBASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 AP003071.4-201ENST00000562276 1284 ntBASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 AC011298.2-201ENST00000617989 482 ntBASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 FSCN1P1-201ENST00000568912 1481 ntBASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.4■□□□□ 0.7
RAI2Q9Y5P3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAI2Q9Y5P3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.39■□□□□ 0.7
RAI2Q9Y5P3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAI2Q9Y5P3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAI2Q9Y5P3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAI2Q9Y5P3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 AC008040.2-201ENST00000461049 708 ntBASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 AC091390.4-202ENST00000476426 537 ntBASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 AC116562.2-201ENST00000507042 360 ntBASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 AL049597.2-201ENST00000565575 961 ntBASIC19.39■□□□□ 0.69
RAI2Q9Y5P3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms