Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HRH3Q9Y5N1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HRH3Q9Y5N1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HRH3Q9Y5N1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 MESTP1-201ENST00000404287 994 ntBASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC004980.1-204ENST00000429707 299 ntBASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC116562.2-201ENST00000507042 360 ntBASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 MIR6786-201ENST00000616843 113 ntBASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 AL445675.2-201ENST00000620291 557 ntBASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 CYP2D8P-201ENST00000433633 1490 ntBASIC17.69■□□□□ 0.42
HRH3Q9Y5N1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 UNC93B2-201ENST00000285383 730 ntBASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HRH3Q9Y5N1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms