Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 AL512408.1-201ENST00000569378 2000 ntBASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 AC007225.1-201ENST00000566331 1836 ntBASIC18.63■□□□□ 0.57
PCDHGA3Q9Y5H0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 DUX4L26-201ENST00000489078 1255 ntBASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 AC099778.1-201ENST00000568593 1911 ntBASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 AC098818.2-201ENST00000564925 2320 ntBASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA3Q9Y5H0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 AC104076.2-201ENST00000448912 469 ntBASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 AC128688.1-201ENST00000487626 519 ntBASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 AC097488.1-201ENST00000507834 756 ntBASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 AC130371.2-201ENST00000619443 611 ntBASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA3Q9Y5H0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 PHGDH-210ENST00000641115 1638 ntBASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA3Q9Y5H0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms