Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 PRSS44-201ENST00000515154 1146 ntBASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 AC139887.4-201ENST00000607877 719 ntBASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.17■■□□□ 1.14
CTDP1Q9Y5B0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 AC117947.1-201ENST00000427448 529 ntBASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 AC092647.4-201ENST00000457211 535 ntBASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 COX11P1-201ENST00000489116 835 ntBASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTDP1Q9Y5B0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 RNF152P1-201ENST00000397754 604 ntBASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 AC141257.4-201ENST00000634557 245 ntBASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 AC136944.6-201ENST00000634818 245 ntBASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTDP1Q9Y5B0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 KRT8P11-201ENST00000409686 1436 ntBASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CTDP1Q9Y5B0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 AC022616.7-201ENST00000525383 220 ntBASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 AC140113.3-201ENST00000605663 199 ntBASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 AL138966.2-201ENST00000621997 464 ntBASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 TCF3P1-201ENST00000423021 1937 ntBASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CTDP1Q9Y5B0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CTDP1Q9Y5B0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.13■■□□□ 1.13
CTDP1Q9Y5B0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.13■■□□□ 1.13
CTDP1Q9Y5B0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CTDP1Q9Y5B0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms