Protein–RNA interactions for Protein: Q9Y4G8

RAPGEF2, Rap guanine nucleotide exchange factor 2, humanhuman

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2Q9Y4G8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
RAPGEF2Q9Y4G8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 LINC01311-201ENST00000565162 1445 ntBASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF2Q9Y4G8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 AL450487.1-201ENST00000426799 995 ntBASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF2Q9Y4G8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 HBZP1-201ENST00000354915 429 ntBASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 ATP5G2P1-201ENST00000433580 426 ntBASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 NPAP1P7-201ENST00000613027 823 ntBASIC31.21■■■□□ 2.59
RAPGEF2Q9Y4G8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC31.2■■■□□ 2.59
RAPGEF2Q9Y4G8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF2Q9Y4G8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC31.2■■■□□ 2.59
RAPGEF2Q9Y4G8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC31.2■■■□□ 2.58
RAPGEF2Q9Y4G8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF2Q9Y4G8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 FGF14-AS2-201ENST00000606448 1074 ntBASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF2Q9Y4G8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF2Q9Y4G8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
RAPGEF2Q9Y4G8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
RAPGEF2Q9Y4G8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF2Q9Y4G8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms