Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF11Q9Y3C5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RNF11Q9Y3C5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 AP003097.1-201ENST00000530657 1135 ntBASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF11Q9Y3C5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF11Q9Y3C5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms