Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 AC244015.2-201ENST00000616358 1861 ntBASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3H4Q9UPT8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 HLA-F-220ENST00000434407 884 ntBASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3H4Q9UPT8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 MIR1233-2-201ENST00000408138 82 ntBASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 MIR1233-1-201ENST00000408722 82 ntBASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZC3H4Q9UPT8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 TSPY22P-201ENST00000427496 604 ntBASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 KRT16P4-201ENST00000453883 522 ntBASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 TOB2P1-201ENST00000469761 992 ntBASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 AC064862.7-201ENST00000604520 867 ntBASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 AL353801.3-201ENST00000609898 542 ntBASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.22■■□□□ 1.31
ZC3H4Q9UPT8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 MIR662-201ENST00000384847 95 ntBASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZC3H4Q9UPT8 AC026310.3-201ENST00000625186 2373 ntBASIC23.2■■□□□ 1.31
ZC3H4Q9UPT8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
ZC3H4Q9UPT8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.2■■□□□ 1.3
ZC3H4Q9UPT8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms