Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 AC121338.2-201ENST00000622535 1744 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 MIR574-201ENST00000385209 96 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 AC091304.2-201ENST00000564639 760 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 MIR3180-1-201ENST00000580374 94 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 MIR3180-3-201ENST00000584616 94 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 KRT18P1-202ENST00000452408 1331 ntBASIC18.13■□□□□ 0.49
LHX6Q9UPM6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LHX6Q9UPM6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 TSPY19P-201ENST00000418461 509 ntBASIC18.12■□□□□ 0.49
LHX6Q9UPM6 AL645929.1-201ENST00000420084 975 ntBASIC18.12■□□□□ 0.49
LHX6Q9UPM6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 TSPY18P-201ENST00000441642 509 ntBASIC18.12■□□□□ 0.49
LHX6Q9UPM6 BX276092.5-203ENST00000456199 560 ntBASIC18.12■□□□□ 0.49
LHX6Q9UPM6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 AP006587.1-201ENST00000534129 1502 ntBASIC18.12■□□□□ 0.49
LHX6Q9UPM6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LHX6Q9UPM6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 AL121672.3-201ENST00000608644 468 ntBASIC18.11■□□□□ 0.49
LHX6Q9UPM6 AL121772.3-201ENST00000610840 674 ntBASIC18.11■□□□□ 0.49
LHX6Q9UPM6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 KRT8P20-201ENST00000423953 1409 ntBASIC18.11■□□□□ 0.49
LHX6Q9UPM6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX6Q9UPM6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 AL049796.1-201ENST00000565336 1766 ntBASIC18.1■□□□□ 0.49
LHX6Q9UPM6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.1■□□□□ 0.49
LHX6Q9UPM6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.1■□□□□ 0.49
LHX6Q9UPM6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 YBX1P10-201ENST00000444752 975 ntBASIC18.1■□□□□ 0.49
LHX6Q9UPM6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 AL139424.1-201ENST00000607572 797 ntBASIC18.1■□□□□ 0.49
LHX6Q9UPM6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX6Q9UPM6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms