Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
DUX4Q9UBX2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.83■□□□□ 0.28
DUX4Q9UBX2 OR6D1P-203ENST00000641209 4860 ntBASIC16.83■□□□□ 0.28
DUX4Q9UBX2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX4Q9UBX2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.83■□□□□ 0.28
DUX4Q9UBX2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX4Q9UBX2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
DUX4Q9UBX2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 AC093503.3-201ENST00000624917 2352 ntBASIC16.82■□□□□ 0.28
DUX4Q9UBX2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX4Q9UBX2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 AC005332.7-201ENST00000614046 2005 ntBASIC16.81■□□□□ 0.28
DUX4Q9UBX2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.81■□□□□ 0.28
DUX4Q9UBX2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
DUX4Q9UBX2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms