Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 KRT16P5-201ENST00000455284 522 ntBASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 KRT18P16-201ENST00000510337 1294 ntBASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 KRT8P8-201ENST00000434750 1448 ntBASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
LINC00474Q9P2X8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 TSPY20P-201ENST00000450910 630 ntBASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 AP001412.1-201ENST00000608405 714 ntBASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 AC005082.1-201ENST00000413042 2259 ntBASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00474Q9P2X8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 KRASP1-201ENST00000407852 552 ntBASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00474Q9P2X8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms