Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 AL136038.3-201ENST00000561909 1096 ntBASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDLIM7Q9NR12 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 Z85996.1-201ENST00000494644 937 ntBASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDLIM7Q9NR12 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDLIM7Q9NR12 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
PDLIM7Q9NR12 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
PDLIM7Q9NR12 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PDLIM7Q9NR12 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PDLIM7Q9NR12 AC073130.3-201ENST00000624389 2278 ntBASIC21.52■■□□□ 1.03
PDLIM7Q9NR12 TREX1-205ENST00000625293 1783 ntBASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.51■■□□□ 1.03
PDLIM7Q9NR12 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PDLIM7Q9NR12 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.49■■□□□ 1.03
PDLIM7Q9NR12 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms