Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 AP000867.3-201ENST00000524675 377 ntBASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZFYVE28Q9HCC9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 TSPY22P-201ENST00000427496 604 ntBASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 DRAXINP1-201ENST00000437611 948 ntBASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZFYVE28Q9HCC9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 LINC00265-3P-201ENST00000447588 903 ntBASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ZFYVE28Q9HCC9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 AC079776.4-201ENST00000511039 504 ntBASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 FOSL1P1-201ENST00000511041 816 ntBASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 TPSP2-201ENST00000561760 610 ntBASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZFYVE28Q9HCC9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 HLA-F-220ENST00000434407 884 ntBASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 KRT18P31-201ENST00000506277 1292 ntBASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 AC106795.1-205ENST00000512851 1056 ntBASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 AL662844.1-201ENST00000546340 181 ntBASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 AC079602.3-201ENST00000623931 403 ntBASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZFYVE28Q9HCC9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
ZFYVE28Q9HCC9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
ZFYVE28Q9HCC9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.1
ZFYVE28Q9HCC9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 MIR662-201ENST00000384847 95 ntBASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZFYVE28Q9HCC9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms