Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VCX3BQ9H321 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCX3BQ9H321 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.27■□□□□ 0.51
VCX3BQ9H321 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VCX3BQ9H321 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VCX3BQ9H321 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VCX3BQ9H321 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 AC007322.3-201ENST00000426526 701 ntBASIC18.26■□□□□ 0.51
VCX3BQ9H321 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCX3BQ9H321 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VCX3BQ9H321 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 KRT8P17-201ENST00000453110 1448 ntBASIC18.25■□□□□ 0.51
VCX3BQ9H321 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 AC239859.2-201ENST00000444165 318 ntBASIC18.25■□□□□ 0.51
VCX3BQ9H321 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCX3BQ9H321 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VCX3BQ9H321 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 AC008764.6-201ENST00000595909 2069 ntBASIC18.24■□□□□ 0.51
VCX3BQ9H321 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VCX3BQ9H321 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms