Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 B3GAT3P1-201ENST00000471720 806 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 FITM1-202ENST00000559294 800 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 MIR4760-201ENST00000585040 80 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 AC110760.3-201ENST00000598794 467 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 AC018754.1-201ENST00000607486 925 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 MIR6786-201ENST00000616843 113 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 AC084824.3-201ENST00000620472 856 ntBASIC21.2■□□□□ 0.98
RNF39Q9H2S5 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF39Q9H2S5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 AC099778.1-201ENST00000568593 1911 ntBASIC21.19■□□□□ 0.98
RNF39Q9H2S5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 AP001271.2-201ENST00000624018 1556 ntBASIC21.19■□□□□ 0.98
RNF39Q9H2S5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RNF39Q9H2S5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 SSR1P1-201ENST00000407630 814 ntBASIC21.18■□□□□ 0.98
RNF39Q9H2S5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 AC008040.2-201ENST00000461049 708 ntBASIC21.18■□□□□ 0.98
RNF39Q9H2S5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 AC010947.1-201ENST00000623454 693 ntBASIC21.18■□□□□ 0.98
RNF39Q9H2S5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF39Q9H2S5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 BNIP3P39-201ENST00000601077 554 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC096947.1-201ENST00000603233 470 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC131212.4-201ENST00000623606 975 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC068057.2-201ENST00000624047 895 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 FSCN1P1-201ENST00000568912 1481 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.17■□□□□ 0.98
RNF39Q9H2S5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF39Q9H2S5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms