Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 AC004264.1-201ENST00000608354 794 ntBASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 NBPF21P-201ENST00000425093 1451 ntBASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC68Q9H2F9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 AC069544.1-201ENST00000609399 999 ntBASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC68Q9H2F9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CCDC68Q9H2F9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CCDC68Q9H2F9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC68Q9H2F9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC68Q9H2F9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms