Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 AC011498.5-201ENST00000592027 486 ntBASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 AL137060.1-201ENST00000618151 2648 ntBASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 AC036111.1-201ENST00000533973 1582 ntBASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
KRTAP4-1Q9BYQ7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP4-1Q9BYQ7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP4-1Q9BYQ7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC9.96□□□□□ -0.81
KRTAP4-1Q9BYQ7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP4-1Q9BYQ7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
KRTAP4-1Q9BYQ7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP4-1Q9BYQ7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 PRELID1P1-202ENST00000567272 903 ntBASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 AP002414.4-201ENST00000589764 1148 ntBASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 AL732292.2-201ENST00000609649 430 ntBASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-1Q9BYQ7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AL023284.2-201ENST00000405850 579 ntBASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 EMBP1-201ENST00000458200 901 ntBASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 KRT8P10-201ENST00000450021 1447 ntBASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-1Q9BYQ7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms