Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 AC125437.2-201ENST00000625180 2167 ntBASIC16.92■□□□□ 0.3
VRK1Q99986 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 KRT17P2-201ENST00000300992 1314 ntBASIC16.92■□□□□ 0.3
VRK1Q99986 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VRK1Q99986 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK1Q99986 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VRK1Q99986 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VRK1Q99986 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.91■□□□□ 0.3
VRK1Q99986 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK1Q99986 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.91■□□□□ 0.3
VRK1Q99986 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK1Q99986 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.91■□□□□ 0.3
VRK1Q99986 RARRES2P10-201ENST00000564312 460 ntBASIC16.91■□□□□ 0.3
VRK1Q99986 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.91■□□□□ 0.3
VRK1Q99986 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VRK1Q99986 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VRK1Q99986 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VRK1Q99986 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VRK1Q99986 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.91■□□□□ 0.3
VRK1Q99986 AC020763.4-201ENST00000623414 4170 ntBASIC16.9■□□□□ 0.3
VRK1Q99986 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK1Q99986 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.9■□□□□ 0.3
VRK1Q99986 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.9■□□□□ 0.3
VRK1Q99986 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 BCL2-203ENST00000589955 5011 ntBASIC16.9■□□□□ 0.3
VRK1Q99986 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK1Q99986 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.9■□□□□ 0.3
VRK1Q99986 KRT16P5-201ENST00000455284 522 ntBASIC16.9■□□□□ 0.3
VRK1Q99986 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK1Q99986 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.9■□□□□ 0.3
VRK1Q99986 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.9■□□□□ 0.3
VRK1Q99986 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK1Q99986 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.9■□□□□ 0.3
VRK1Q99986 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VRK1Q99986 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.89■□□□□ 0.3
VRK1Q99986 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 KRT16P6-202ENST00000425692 1426 ntBASIC16.89■□□□□ 0.29
VRK1Q99986 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.89■□□□□ 0.29
VRK1Q99986 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VRK1Q99986 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK1Q99986 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VRK1Q99986 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.89■□□□□ 0.29
VRK1Q99986 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.89■□□□□ 0.29
VRK1Q99986 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 HTR7P1-201ENST00000538670 1336 ntBASIC16.89■□□□□ 0.29
VRK1Q99986 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK1Q99986 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK1Q99986 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK1Q99986 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK1Q99986 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VRK1Q99986 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.88■□□□□ 0.29
VRK1Q99986 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms