Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF5Q99942 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF5Q99942 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF5Q99942 UBE2SP1-201ENST00000450587 669 ntBASIC15.34■□□□□ 0.05
RNF5Q99942 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF5Q99942 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.34■□□□□ 0.05
RNF5Q99942 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF5Q99942 AP001412.1-201ENST00000608405 714 ntBASIC15.34■□□□□ 0.05
RNF5Q99942 AL031985.4-201ENST00000642138 673 ntBASIC15.34■□□□□ 0.05
RNF5Q99942 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF5Q99942 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF5Q99942 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RNF5Q99942 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF5Q99942 AL161938.1-201ENST00000569833 2180 ntBASIC15.34■□□□□ 0.05
RNF5Q99942 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF5Q99942 IRX1P1-201ENST00000438849 1838 ntBASIC15.33■□□□□ 0.05
RNF5Q99942 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RNF5Q99942 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RNF5Q99942 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF5Q99942 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF5Q99942 KRT8P41-201ENST00000533985 1514 ntBASIC15.33■□□□□ 0.05
RNF5Q99942 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF5Q99942 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.33■□□□□ 0.05
RNF5Q99942 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 AC004980.1-204ENST00000429707 299 ntBASIC15.33■□□□□ 0.04
RNF5Q99942 Z85996.1-201ENST00000494644 937 ntBASIC15.33■□□□□ 0.04
RNF5Q99942 PRSS44-201ENST00000515154 1146 ntBASIC15.33■□□□□ 0.04
RNF5Q99942 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.33■□□□□ 0.04
RNF5Q99942 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF5Q99942 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF5Q99942 AF186192.3-201ENST00000583427 947 ntBASIC15.33■□□□□ 0.04
RNF5Q99942 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF5Q99942 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF5Q99942 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF5Q99942 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF5Q99942 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF5Q99942 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF5Q99942 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF5Q99942 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF5Q99942 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RNF5Q99942 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF5Q99942 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF5Q99942 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.32■□□□□ 0.04
RNF5Q99942 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF5Q99942 AC142381.4-202ENST00000563973 229 ntBASIC15.32■□□□□ 0.04
RNF5Q99942 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF5Q99942 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.32■□□□□ 0.04
RNF5Q99942 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RNF5Q99942 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF5Q99942 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF5Q99942 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF5Q99942 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RNF5Q99942 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF5Q99942 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms