Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.15■□□□□ 0.82
SMOQ99835 EGLN1P1-201ENST00000531623 762 ntBASIC20.15■□□□□ 0.82
SMOQ99835 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMOQ99835 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.15■□□□□ 0.82
SMOQ99835 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.15■□□□□ 0.82
SMOQ99835 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMOQ99835 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SMOQ99835 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMOQ99835 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMOQ99835 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMOQ99835 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMOQ99835 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.14■□□□□ 0.81
SMOQ99835 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.14■□□□□ 0.81
SMOQ99835 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.14■□□□□ 0.81
SMOQ99835 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SMOQ99835 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.14■□□□□ 0.81
SMOQ99835 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.14■□□□□ 0.81
SMOQ99835 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.14■□□□□ 0.81
SMOQ99835 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.14■□□□□ 0.81
SMOQ99835 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.14■□□□□ 0.81
SMOQ99835 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.14■□□□□ 0.81
SMOQ99835 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMOQ99835 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SMOQ99835 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.13■□□□□ 0.81
SMOQ99835 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.13■□□□□ 0.81
SMOQ99835 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.13■□□□□ 0.81
SMOQ99835 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.13■□□□□ 0.81
SMOQ99835 AL032819.2-201ENST00000624543 2162 ntBASIC20.13■□□□□ 0.81
SMOQ99835 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMOQ99835 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SMOQ99835 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMOQ99835 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.13■□□□□ 0.81
SMOQ99835 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.13■□□□□ 0.81
SMOQ99835 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.13■□□□□ 0.81
SMOQ99835 AL023803.3-201ENST00000615559 522 ntBASIC20.13■□□□□ 0.81
SMOQ99835 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SMOQ99835 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMOQ99835 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SMOQ99835 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SMOQ99835 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SMOQ99835 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SMOQ99835 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.12■□□□□ 0.81
SMOQ99835 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMOQ99835 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.12■□□□□ 0.81
SMOQ99835 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 KRT18P22-201ENST00000402024 1347 ntBASIC20.12■□□□□ 0.81
SMOQ99835 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 ECEL1P2-202ENST00000465689 757 ntBASIC20.12■□□□□ 0.81
SMOQ99835 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.12■□□□□ 0.81
SMOQ99835 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
SMOQ99835 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.12■□□□□ 0.81
SMOQ99835 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.12■□□□□ 0.81
SMOQ99835 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 SLC25A24-204ENST00000569674 2357 ntBASIC20.12■□□□□ 0.81
SMOQ99835 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMOQ99835 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.11■□□□□ 0.81
SMOQ99835 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 SLC25A1P2-201ENST00000430693 912 ntBASIC20.11■□□□□ 0.81
SMOQ99835 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.11■□□□□ 0.81
SMOQ99835 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMOQ99835 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMOQ99835 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SMOQ99835 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SMOQ99835 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms