Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 BX276092.2-201ENST00000417668 665 ntBASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 RAP2CP1-201ENST00000605103 478 ntBASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC47A1Q96FL8 AC018470.1-201ENST00000624790 3129 ntBASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 AC116351.2-201ENST00000606540 1585 ntBASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 AC093525.10-201ENST00000625130 1569 ntBASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC47A1Q96FL8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 FP475955.4-201ENST00000623131 1990 ntBASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC47A1Q96FL8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 CROCCP5-201ENST00000436658 830 ntBASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC47A1Q96FL8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 GPX1P1-201ENST00000388829 606 ntBASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 AC006970.2-201ENST00000450065 779 ntBASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 AL121832.2-201ENST00000610979 668 ntBASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC47A1Q96FL8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC47A1Q96FL8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms