Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 AP002469.2-201ENST00000531724 424 ntBASIC22.48■■□□□ 1.19
CDCA5Q96FF9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.48■■□□□ 1.19
CDCA5Q96FF9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 SEC1P-202ENST00000473944 940 ntBASIC22.47■■□□□ 1.19
CDCA5Q96FF9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 KRT18P31-201ENST00000506277 1292 ntBASIC22.47■■□□□ 1.19
CDCA5Q96FF9 AC079776.4-201ENST00000511039 504 ntBASIC22.47■■□□□ 1.19
CDCA5Q96FF9 AC106795.1-205ENST00000512851 1056 ntBASIC22.47■■□□□ 1.19
CDCA5Q96FF9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 AL157888.1-201ENST00000631930 593 ntBASIC22.47■■□□□ 1.19
CDCA5Q96FF9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDCA5Q96FF9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 MIR662-201ENST00000384847 95 ntBASIC22.46■■□□□ 1.19
CDCA5Q96FF9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 AL136038.4-201ENST00000603606 1261 ntBASIC22.46■■□□□ 1.19
CDCA5Q96FF9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.46■■□□□ 1.19
CDCA5Q96FF9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDCA5Q96FF9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 AL023284.2-201ENST00000405850 579 ntBASIC22.45■■□□□ 1.18
CDCA5Q96FF9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 TOB2P1-201ENST00000469761 992 ntBASIC22.45■■□□□ 1.18
CDCA5Q96FF9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 AC012615.1-201ENST00000565797 1299 ntBASIC22.45■■□□□ 1.18
CDCA5Q96FF9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 RNF126P1-202ENST00000569893 925 ntBASIC22.45■■□□□ 1.18
CDCA5Q96FF9 LINC01711-201ENST00000598340 967 ntBASIC22.45■■□□□ 1.18
CDCA5Q96FF9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDCA5Q96FF9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CDCA5Q96FF9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms