Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LINC01711-201ENST00000598340 967 ntBASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 AC139530.3-201ENST00000620344 690 ntBASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 MIR662-201ENST00000384847 95 ntBASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 TOB2P1-201ENST00000469761 992 ntBASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 RNF126P1-202ENST00000569893 925 ntBASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM43Q96BQ3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 SEC1P-202ENST00000473944 940 ntBASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 AL662844.1-201ENST00000546340 181 ntBASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 AC012615.1-201ENST00000565797 1299 ntBASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 AL157888.1-201ENST00000631930 593 ntBASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM43Q96BQ3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 HLA-A-201ENST00000376802 1334 ntBASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 AL121912.1-201ENST00000603683 238 ntBASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM43Q96BQ3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 AC036111.1-201ENST00000533973 1582 ntBASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM43Q96BQ3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 KRT16P4-201ENST00000453883 522 ntBASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 AC120114.3-201ENST00000611923 658 ntBASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 AL391807.1-203ENST00000604392 2365 ntBASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM43Q96BQ3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM43Q96BQ3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms