Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 RBM17P1-201ENST00000453646 1190 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 TSPY15P-201ENST00000457163 923 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 Z85996.1-201ENST00000494644 937 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 Z82202.1-201ENST00000623446 1880 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 AC007952.6-201ENST00000573168 2673 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 AC003957.1-201ENST00000625108 2673 ntBASIC20.15■□□□□ 0.82
RNF139Q8WU17 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF139Q8WU17 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF139Q8WU17 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
RNF139Q8WU17 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF139Q8WU17 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF139Q8WU17 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF139Q8WU17 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 BX088651.1-201ENST00000540551 451 ntBASIC20.14■□□□□ 0.81
RNF139Q8WU17 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 AC130371.2-201ENST00000619443 611 ntBASIC20.14■□□□□ 0.81
RNF139Q8WU17 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF139Q8WU17 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF139Q8WU17 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF139Q8WU17 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF139Q8WU17 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 AC104417.2-201ENST00000562989 1793 ntBASIC20.13■□□□□ 0.81
RNF139Q8WU17 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 MESTP1-201ENST00000404287 994 ntBASIC20.13■□□□□ 0.81
RNF139Q8WU17 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.13■□□□□ 0.81
RNF139Q8WU17 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 DGCR10-201ENST00000609839 495 ntBASIC20.13■□□□□ 0.81
RNF139Q8WU17 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF139Q8WU17 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF139Q8WU17 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 AP000525.1-201ENST00000608286 694 ntBASIC20.12■□□□□ 0.81
RNF139Q8WU17 AC073912.3-201ENST00000624414 853 ntBASIC20.12■□□□□ 0.81
RNF139Q8WU17 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF139Q8WU17 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF139Q8WU17 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms