Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 FITM1-202ENST00000559294 800 ntBASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 AC026271.3-201ENST00000571884 352 ntBASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 AC145285.6-201ENST00000604632 637 ntBASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 AC010331.1-201ENST00000611423 582 ntBASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDND2Q8NHS1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 FSCN1P1-201ENST00000568912 1481 ntBASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 NAPSB-206ENST00000562112 1266 ntBASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDND2Q8NHS1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 AC131212.4-201ENST00000623606 975 ntBASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 TCF3P1-201ENST00000423021 1937 ntBASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDND2Q8NHS1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 LINC01568-207ENST00000641790 1380 ntBASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 MESTP1-201ENST00000404287 994 ntBASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 AC004980.1-204ENST00000429707 299 ntBASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 B3GAT3P1-201ENST00000471720 806 ntBASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDND2Q8NHS1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms