Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST2Q8NFU1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 AL158211.5-201ENST00000623583 2518 ntBASIC20.65■□□□□ 0.9
BEST2Q8NFU1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.65■□□□□ 0.9
BEST2Q8NFU1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 MIR1224-201ENST00000408193 85 ntBASIC20.65■□□□□ 0.9
BEST2Q8NFU1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 SLC25A24-204ENST00000569674 2357 ntBASIC20.65■□□□□ 0.9
BEST2Q8NFU1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST2Q8NFU1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.64■□□□□ 0.9
BEST2Q8NFU1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BEST2Q8NFU1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.64■□□□□ 0.9
BEST2Q8NFU1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.64■□□□□ 0.9
BEST2Q8NFU1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.64■□□□□ 0.89
BEST2Q8NFU1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST2Q8NFU1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 AC128688.1-201ENST00000487626 519 ntBASIC20.63■□□□□ 0.89
BEST2Q8NFU1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST2Q8NFU1 Z82202.1-201ENST00000623446 1880 ntBASIC20.62■□□□□ 0.89
BEST2Q8NFU1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 SLC25A1P2-201ENST00000430693 912 ntBASIC20.62■□□□□ 0.89
BEST2Q8NFU1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 TSPY23P-201ENST00000440136 739 ntBASIC20.62■□□□□ 0.89
BEST2Q8NFU1 CCR12P-201ENST00000446203 998 ntBASIC20.62■□□□□ 0.89
BEST2Q8NFU1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 AC010331.1-201ENST00000611423 582 ntBASIC20.62■□□□□ 0.89
BEST2Q8NFU1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 AC116562.4-202ENST00000641738 218 ntBASIC20.62■□□□□ 0.89
BEST2Q8NFU1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST2Q8NFU1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms