Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SYNPOQ8N3V7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 KRT18P38-201ENST00000449496 1282 ntBASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 ZNF444P1-201ENST00000559497 298 ntBASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPOQ8N3V7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 AC112907.2-201ENST00000448639 330 ntBASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNPOQ8N3V7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SYNPOQ8N3V7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 AC026396.1-201ENST00000419388 421 ntBASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 AL691432.3-201ENST00000621860 400 ntBASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNPOQ8N3V7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms