Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 AC098818.2-201ENST00000564925 2320 ntBASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 AL158211.5-201ENST00000623583 2518 ntBASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 FAM207BP-201ENST00000447172 505 ntBASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 DUX4L26-201ENST00000489078 1255 ntBASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 AC006011.2-201ENST00000621313 1158 ntBASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PHTF2Q8N3S3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 AC018445.3-201ENST00000624177 1945 ntBASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 ARMC10P1-201ENST00000313754 855 ntBASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.83■□□□□ 0.77
PHTF2Q8N3S3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PHTF2Q8N3S3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PHTF2Q8N3S3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 AC128688.1-201ENST00000487626 519 ntBASIC19.81■□□□□ 0.76
PHTF2Q8N3S3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms