Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 AC092329.2-201ENST00000598402 547 ntBASIC20.77■□□□□ 0.92
HERC6Q8IVU3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HERC6Q8IVU3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HERC6Q8IVU3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.77■□□□□ 0.91
HERC6Q8IVU3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HERC6Q8IVU3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
HERC6Q8IVU3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HERC6Q8IVU3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 HBZP1-201ENST00000354915 429 ntBASIC20.75■□□□□ 0.91
HERC6Q8IVU3 AL645929.1-201ENST00000420084 975 ntBASIC20.75■□□□□ 0.91
HERC6Q8IVU3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 AL845331.1-201ENST00000424978 1190 ntBASIC20.75■□□□□ 0.91
HERC6Q8IVU3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HERC6Q8IVU3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 KRT8P11-201ENST00000409686 1436 ntBASIC20.74■□□□□ 0.91
HERC6Q8IVU3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 AP001271.2-201ENST00000624018 1556 ntBASIC20.74■□□□□ 0.91
HERC6Q8IVU3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
HERC6Q8IVU3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 BX119927.1-201ENST00000636596 1552 ntBASIC20.73■□□□□ 0.91
HERC6Q8IVU3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 AC004870.1-201ENST00000315132 882 ntBASIC20.73■□□□□ 0.91
HERC6Q8IVU3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 PVRIG2P-201ENST00000435460 978 ntBASIC20.73■□□□□ 0.91
HERC6Q8IVU3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.73■□□□□ 0.91
HERC6Q8IVU3 AC111152.3-201ENST00000569699 673 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms