Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 KRT8P17-201ENST00000453110 1448 ntBASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM53Q6P2H8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM53Q6P2H8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM53Q6P2H8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM53Q6P2H8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM53Q6P2H8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM53Q6P2H8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM53Q6P2H8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM53Q6P2H8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 AL512408.1-201ENST00000569378 2000 ntBASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 KRT16P6-202ENST00000425692 1426 ntBASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM53Q6P2H8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms