Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 SLC25A1P1-201ENST00000528351 927 ntBASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 AC099336.1-202ENST00000602961 463 ntBASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 AL157888.1-201ENST00000631930 593 ntBASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 AL391807.1-203ENST00000604392 2365 ntBASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 AP001271.2-201ENST00000624018 1556 ntBASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.78■□□□□ 0.76
PTCRAQ6ISU1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 LINC00167-201ENST00000530583 1419 ntBASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCRAQ6ISU1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 AC036111.1-201ENST00000533973 1582 ntBASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 AKR1C7P-201ENST00000305623 895 ntBASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 SMG8-203ENST00000578922 2178 ntBASIC19.76■□□□□ 0.75
PTCRAQ6ISU1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 SAPCD2P3-201ENST00000455031 850 ntBASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 SEC1P-202ENST00000473944 940 ntBASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCRAQ6ISU1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 AC007225.1-201ENST00000566331 1836 ntBASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 POLD2P1-201ENST00000511220 997 ntBASIC19.74■□□□□ 0.75
PTCRAQ6ISU1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms