Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 Z82202.1-201ENST00000623446 1880 ntBASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC39BQ5VTQ0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 AC004980.1-204ENST00000429707 299 ntBASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TTC39BQ5VTQ0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 AC116562.2-201ENST00000507042 360 ntBASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TTC39BQ5VTQ0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TTC39BQ5VTQ0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
TTC39BQ5VTQ0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
TTC39BQ5VTQ0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TTC39BQ5VTQ0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms