Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 IFNL4P1-201ENST00000607083 540 ntBASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 AC092119.3-201ENST00000612618 583 ntBASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CDC42BPAQ5VT25 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 HLA-F-220ENST00000434407 884 ntBASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
CDC42BPAQ5VT25 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 AP002383.4-201ENST00000442518 975 ntBASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CDC42BPAQ5VT25 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 SKP2-204ENST00000508514 821 ntTSL 3 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 MIR3180-5-201ENST00000583743 153 ntBASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 AC079602.3-201ENST00000623931 403 ntBASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC29.08■■■□□ 2.25
CDC42BPAQ5VT25 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 SDHD-206ENST00000528182 754 ntTSL 3 BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 AC111152.3-201ENST00000569699 673 ntBASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
CDC42BPAQ5VT25 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 PRELID1P1-202ENST00000567272 903 ntBASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 TPSP2-201ENST00000561760 610 ntBASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC29.06■■■□□ 2.24
CDC42BPAQ5VT25 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 AC016734.2-201ENST00000624325 1377 ntBASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 RN7SL510P-201ENST00000581311 263 ntBASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 AL157888.1-201ENST00000631930 593 ntBASIC29.05■■■□□ 2.24
CDC42BPAQ5VT25 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 KRT8P10-201ENST00000450021 1447 ntBASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms