Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.74■□□□□ 0.75
ALFQ53S48 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.74■□□□□ 0.75
ALFQ53S48 DGCR10-201ENST00000609839 495 ntBASIC19.74■□□□□ 0.75
ALFQ53S48 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ALFQ53S48 KRT8P9-201ENST00000558927 1449 ntBASIC19.74■□□□□ 0.75
ALFQ53S48 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.74■□□□□ 0.75
ALFQ53S48 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALFQ53S48 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.74■□□□□ 0.75
ALFQ53S48 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ALFQ53S48 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ALFQ53S48 AC116562.4-201ENST00000641316 2276 ntBASIC19.73■□□□□ 0.75
ALFQ53S48 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ALFQ53S48 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.73■□□□□ 0.75
ALFQ53S48 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ALFQ53S48 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 MIR1238-201ENST00000408483 83 ntBASIC19.73■□□□□ 0.75
ALFQ53S48 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.73■□□□□ 0.75
ALFQ53S48 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.73■□□□□ 0.75
ALFQ53S48 AC097488.1-201ENST00000507834 756 ntBASIC19.73■□□□□ 0.75
ALFQ53S48 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.73■□□□□ 0.75
ALFQ53S48 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
ALFQ53S48 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ALFQ53S48 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ALFQ53S48 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALFQ53S48 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ALFQ53S48 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ALFQ53S48 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.72■□□□□ 0.75
ALFQ53S48 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.72■□□□□ 0.75
ALFQ53S48 KRT8P11-201ENST00000409686 1436 ntBASIC19.72■□□□□ 0.75
ALFQ53S48 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 FITM1-202ENST00000559294 800 ntBASIC19.72■□□□□ 0.75
ALFQ53S48 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 SLC25A1P4-201ENST00000567977 778 ntBASIC19.72■□□□□ 0.75
ALFQ53S48 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ALFQ53S48 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.72■□□□□ 0.75
ALFQ53S48 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALFQ53S48 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ALFQ53S48 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 AL032819.2-201ENST00000624543 2162 ntBASIC19.71■□□□□ 0.75
ALFQ53S48 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ALFQ53S48 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ALFQ53S48 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ALFQ53S48 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.71■□□□□ 0.75
ALFQ53S48 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.71■□□□□ 0.75
ALFQ53S48 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.71■□□□□ 0.75
ALFQ53S48 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.71■□□□□ 0.75
ALFQ53S48 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.71■□□□□ 0.75
ALFQ53S48 AC073912.3-201ENST00000624414 853 ntBASIC19.71■□□□□ 0.75
ALFQ53S48 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ALFQ53S48 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.71■□□□□ 0.75
ALFQ53S48 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 TEX21P-204ENST00000641479 1693 ntBASIC19.71■□□□□ 0.75
ALFQ53S48 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALFQ53S48 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
ALFQ53S48 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALFQ53S48 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms